Hi Nithin,

This can be managed with feature 'Attendance Regularization'. By this feature employees can raise a Regularization application and the attendance will take place on approval of the application. The Feature is available with only Lenvica HRMS Enterprise edition's ESS module.

You can see a demo of ESS from the link below,
ess.lenvica.in

To see the regularization module,
Location: ESS > Attendance > Regularization

Regards,
Rijo